Guide to compatibility

Want to find out whether the Mobile HomeCage fits into your experimental set-up? In this guide to compatibility, we provide the instructions for taking the microscope measurements, selecting a stage, and an air source. If you don’t want to measure the microscope yourself, tell us the maker and the model. Ideally, also send us a front and side picture of your setup with a ruler.

If you are measuring the microscope yourself, watch the video below and read the instructions on taking the measurements.

Mobile HomeCage compatibility with imaging setups – 3 minutes

The Mobile HomeCage models

Let’s recapitulate some basic facts about the Mobile HomeCage. It comes in two sizes: the standard size Mobile HomeCage is compact and compatible with the majority of commercial 2-photon microscopes. The Mobile HomeCage Large allows combining imaging with behavioral readouts. For this reason, the floating cage has a larger diameter (325 mm compared to 180 mm in the standard-size Mobile HomeCage). The frame is also larger: it requires more space in the imaging setup. Both systems can be equipped with locomotion tracking components. Luckily, the sensor board used for tracking is built into the air dispenser. It does not require additional space in the setup. Whether you are using the system with or without locomotion tracking, it takes up the same space.

Measuring the microscope for compatibility

Generic microscope frame for compatibility assessment with the Mobile HomeCage

The picture on the left is a symbolic representation of a microscope frame.

Letters A through F stand for critical dimensions. Pay special attention to the first three measurements.

Compatibility table

The table below explains what the critical dimensions are, what their values must be, and what to do if your measurements do not match the given values. The values are given for the default configuration with the standard rotating clamp:

DimensionsMobile
HomeCage
Mobile HomeCage
Large
Possible fixes
A. Distance from the objective's focal
point to the microscope frame must be
>122 mm >272 mmMobile HomeCage: use an elongated clamp (min distance with elongated clamp 102 mm);
Mobile HomeCage Large: use a smaller cage diameter (ask us about customization)
B. Distance from the objective's focal point (objective retracted) to the table / stage surface must be>70 mm>84 mmLower the stage (to increase the distance); lift the stage or use a riser block (to decrease the distance)
C. Objective's parfocal length must be>40 mm>40 mmUse a parfocal length extender to increase the objective's length or use a low-wall cage with a short neck
D. Objective's length with holder / slider must be>56 mm>56 mmUse a short neck and a low-wall cage
E. Objective's diameter Must be considered in conjunction with
the working distance - contact us
Under ceratain conditions and with certain changes to the standard configuration, it is possible to use up to 100 mm diameter objectives.
F. Objective's holder diameter must be<80 mm<80 mmUse an elongated clamp

The Mobile HomeCage® Large is compatible with these commercial two-photon microscopes:

Selecting a stage

Make sure that the stage can carry the weight of your Mobile HomeCage device. The stage surface can be slightly smaller than the size of the air dispenser. Check the table below for the unpackaged weights and air dispenser sizes (length X width) of the Mobile HomeCage systems:

Type of deviceUnpackaged weight (kg)Air dispenser dimensions (mm)
Mobile HomeCage6.1420 X 300
Mobile HomeCage with tracking capability6.8420 X 300
Mobile HomeCage Large11.5720 X 570
Mobile HomeCage Large with tracking capability13720 X 570
MultiCage Training Arena11.5720 X 570

Sample stages for the Mobile HomeCage systems

Use four fixation slots (compatible with metric and imperial breadboards) to secure the Mobile HomeCage to the stage. Alternatively, use Neurotar’s fixation kit (not included with the Mobile HomeCage system).

The surface of the air dispenser of the Mobile HomeCage Large exceeds the surface of most stages (see the picture on the left: Mobile HomeCage Large on Thorlabs’ stage). Secure the air dispenser to the stage using two out of four fixation slots.

If you frequently move the standard-size Mobile HomeCage in and out of the imaging setup, we recommend using the fixation kit for quickly fixing and securing the Mobile HomeCage in the exact same spot on the XY stage.

Selecting an air source

To operate your Mobile HomeCage device effectively, you’ll need a high-flow, low-pressure air source. The table below outlines airflow requirements for each Mobile HomeCage system type:

Type of deviceAir source specifications
Mobile HomeCage120 L/min at 20 kPa
Mobile HomeCage with tracking capability120 L/min at 20 kPa
Mobile HomeCage Large150 L/min at 20 kPa
Mobile HomeCage Large with tracking capability150 L/min at 20 kPa
MultiCage Training Arena250 L/min at 20 kPa

Most labs use their existing lab air lines, though some require an external portable air source. Any pump or blower that meets or exceeds these specifications will work. Note: We don’t recommend using compressed air tanks due to high pressure and rapid depletion rates, which make them impractical.

Industrial air blowers: Ideal for continuous, high-flow performance without overheating. These often have adjustable airflow, though they can be costly and may require installation by a certified electrician. Neurotar offers a plug-and-play solution based on Leister’s Mono-6 industrial air pump, which we highly recommend. Learn more and order online in our webshop.

Aquarium pumps: Some cost-effective aquarium pumps can work well, and many are readily available on Amazon. However, most lack adjustable airflow. In these cases, we suggest purchasing an airflow regulator. Some aquarium pumps may cause unwanted vibrations; if this happens, we have a quick fix. Watch this video for more details, or contact us for troubleshooting tips and specific recommendations, as options may vary by location.

Video note: The industrial air pump featured in this video is the Leister Robust. In 2024, we updated our recommendation to Leister’s Mono-6 due to its compact design, integrated airflow adjustment, and cost-efficiency. We will update the video soon.

Using your existing air source with MultiCage

Is your current air source for the Mobile HomeCage or Mobile HomeCage Large incompatible with the MultiCage? There’s a simple, low-cost solution to use the MultiCage at airflow levels below 250 L/min. Download the DIY instructions here:

Air pressure regulation

For stable air pressure, we recommend adding a basic air pressure regulator to your airline. A simple model is usually sufficient, but models with moisture and debris filters offer added benefits and are widely available on Amazon. Note: Avoid using a pressure regulator with aquarium pumps, as it can increase resistance, potentially requiring additional airflow and increasing noise.

Basic air pressure regulator

Noise reduction tips

Most noise in the system comes from the air source and connectors. To reduce noise, try increasing the distance between the Mobile HomeCage and the air source using a longer hose and increasing airflow. Alternatively, consider enclosing the air source in a box for sound insulation.